The third WG2 meeting of COST action FA1306
"The quest for tolerant varieties - Phenotyping at plant and cellular level",
joined with the 2nd world INPPO meeting, and took place in Bratislava (Slovakia), 5-6 September 2016:
Phenotyping SWOP analysis (SWOP) Strength, Weakness, Opportunity, Threat
Group picture of the participants:
Abstracts as pdf-Download !
PROGRAM
WG2 meeting: Phenotyping SWOT analysis:
Strength, Weakness, Opportunity, Threats (COST FA1306)
September 5, 2016 |
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08:30 |
Arrival and Check-in each participant must sign for its attendance every day |
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09:30 |
Welcome / Introductory Comments |
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Session 1 – PART 1: Exploration and Integration of omiCs datasets Discussion Leaders: Estelle Goulas and Sebastien CARPENTIER |
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09:40 |
Keynote Lecture - Kim-Ahn Lê Cao (AU) “Multivariate statistical mathods for data exploration, integration and molecular biomarker discovery” |
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10:20 |
Monika MEIJON (ES) “Systems biology approach to identify novel biomarkers of wood quality in Mediterranean pine (Pinus pinaster Aiton)” |
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10:40 |
Jelle VAN WESEMAEL (BE) “Quantification and identification of allele specific proteins for polyploid non-model crops: proof of principle for 3 banana genotypes/phenotypes” |
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11:00 |
Coffee break |
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Session 1 – PART 2: Plant Experimental Assay Ontology Discussion Leaders: Carla PINHEIRO and Katarina KLUBICOVA |
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11:20 |
Keynote Lecture - Inês Chaves (PT) “The use of Ontologies to describe Plant Experimental Assays” |
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11:40 |
Anahita NAFISSI (D) “Semantic Web for Data Integration and Data Exchange among Plant Phenomics Relational Databases” |
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12:00 |
DISCUSSION session with invited speakers |
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12:50 |
Lunch
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Session 2 – Integrated Proteomics (INPPO JOIN SESSION) Discussion leaders: Vassilis FOTOPOULOS and Martin HAJDUCH |
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14:00 |
Keynote Lecture - Jay THELEN (USA) “Phosphoproteomic resources and technologies - from discovering phosphorylation sites to identifying kinase clients” |
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14:40 |
Keynote Lecture – Franck MENKE (UK) “Targeting Post Translational Modifications in Plant Immunity Signaling”. |
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15:20 |
Michel ZIVY (FR) “Contribution of quantitative proteomics to the analysis of of maize responses to drought stress”. |
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15:40 |
Leonor GUERRA-GUIMARAES (PT) “Two resistance inducers relevant in coffee plant protection show distinct metabolic adjustments”. |
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16:00 |
Christine FINNIE (DK) “Exploring the plant-microbe interface by profiling the surface-associated proteins of barley grains”. |
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16:20 |
Coffee break |
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16:40 |
Stephanie KOSOVA (CZ) “Proteomic analysis of wheat and barley response to abiotic and biotic stress factors using gel-based proteomic approaches” |
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17:00 |
Stephanie WIENKOOP (AT) “Molecular plasticity during drought recovery is characterised by protein turnover dynamics and translational regulation in Medicago truncatula”. |
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18:30 |
Poster Viewing with Wine & Cheese |
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September 6, 2016 |
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09:00 |
Welcome: each participant must sign for its attendance |
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Session 2 (followed) – Integrated Proteomics Discussion leaders: Stephanie WIENKOOP and Michel ZIVY |
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09:20 |
Maria Angeles CASTILLEJO (ES) “Proteomic analysis to understand pea resistance to Fusarium oxysporum”. |
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09:40 |
Vassilis FOTOPOULOS (CY) “The role of proteomics towards the study of PTMs in plant priming phenomena against abiotic stress factors”. |
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10:00 |
Coffee break |
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Session 3 – Phenotyping & Germplasm collection Discussion leaders: Carla PINHEIRO and Christine FINNIE |
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10:30 |
Anyela CAMARGO (UK) “Determining phenological patterns associated with the onset of senescence in a wheat MAGIC mapping population”. |
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10:50 |
Nazemi GHASEMALI (IT) “Prioritizing QTLs based DNA molecular markers for heat stress tolerance using cell membrane stability in durum wheat”. |
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11:10 |
Discussion/brainstorming Discussion Leaders: Sebastien Carpentier (Belgium), Carla Pinheiro (Portugal) and Estelle Goulas (France) |
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12:00 |
Farewell |
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September 4, 2016 – INPPO2016 Congress
September 5, 2016 – WG2 COST meeting
COST meetings are free of charge, also for the persons that will not be selected and reimbursed. For those willing to attend to both INPPO and COST WG2 meetings a reduced fee of 50 euros is proposed.
For detailed informations concerning the INPPO congress, please visit regularly: